Strain Passport - Arthrobacter sp. S41

1. Taxonomy

Taxonomy
Domain Bacteria
Phylum Actinobacteriota
Class Actinomycetia
Order Actinomycetales
Family Micrococcaceae
Genus Glutamicibacter
Species Glutamicibacter sp004320535

2. Assembly Statistics

Assembly Statistics
MAGID MAG06
Size (bp) 2442033
N.contigs 466
GC (%) 55.8
N50 (bp) 5952
Coding Density 81
N.CDSs 2396
Genome Completeness
Completeness 76.34
Contamination 1.30
Strain heterogeneity 22.22

3. Metabolism and Function (KEGG)

KEGG Function Annotation

Arthrobacter sp. S41 KEGG Functional Classification

KEGG Resistome

name Type Level1 Level2 Description KO
ko01504 Gene variants Macrolide resistance genes Transporters K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein K08217
ko01504 Gene variants Macrolide resistance genes Others K06979 mph; macrolide phosphotransferase K06979
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] K07260
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K18346 vanW; vancomycin resistance protein VanW K18346
ko01504 Gene sets Vancomycin resistance modules Vancomycin resistance, D-Ala-D-Lac type [MD:M00651] K18353 vanJ; vancomycin resistance protein VanJ K18353

KEGG Toxins

name Type Level1 Level2 Description KO
ko02042 Type II toxins: Membrane damaging toxins Pore-forming toxins, Other K03699 tlyC; magnesium and cobalt exporter, CNNM family tlyC; magnesium and cobalt exporter, CNNM family K03699
ko02042 Type II toxins: Membrane damaging toxins Pore-forming toxins, Other K11068 hlyIII; hemolysin III hlyIII; hemolysin III K11068

KEGG Bacterial Virulence

GeneID KO Description PFAM
MAG06_HPLHNM_07670 K14956 6 kDa early secretory antigenic target Proteins of 100 residues with WXG [PF06013.15]…

Carbon Metabolism

Nitrogen Metabolism

4. Expert systems

AMRFinderPlus Antimicrobial Resistance

## No AMRFinderPlus data

Virulence factors (VFDB)

## No VFDB data

5. BacDive

## No BacDive data

6. Publications

7. U.S. Patents

First 10 patents out of 42

patent_number patent_title
10154670 Compositions comprising Bacillus strains and methods of use to suppress the activities and growth of fungal plant pathogens
10602743 Method of inducing drought/salt tolerance using Bacillus megaterium
10645936 Bacillus megaterium bioactive compositions and metabolites
10683470 Product for cleaning, sanitizing and hygienization
4332898 Hybrid plasmid and process of making same
4427771 Assay method for amylase activity and method of producing maltose dehydrogenase for use therein
4542098 Production of glucose dehydrogenase and use of the resultant enzyme in the enzymatic synthesis of L-carnitine
4554250 Method of increased production of penicillin acylase and plasmid employed therein
4935359 Fermentation process
5030574 Plasmidless Lac strain of bacilus megaterium QM B1551